PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.8G243500.2.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 276aa    MW: 30964 Da    PI: 4.1756
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.8G243500.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.56.3e-05156199755
                         HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                            + RR ri ++++ LrellP +     +    a ++  ++++Ik Lq
  Prupe.8G243500.2.p 156 LHAKTRRMRIAERLDALRELLPIS-----TEGGQAFVVDDVIDHIKFLQ 199
                         55699*****************97.....34445666666666666665 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508889.89149198IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.5E-8152207IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.1E-5152205IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.64E-5158203No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    Send to blast
MEGQSSLTDP MQLVPLDFCG DAAIDVSQAT GDDPSQQVIM AAEGTAYQTD DLFSPWWTEK  60
PKPSLDSLNY VEFQAESSTF LPKDRSEDIL ESIPLSVSGI DDVGGVSEFQ REVLYSSLRN  120
ACGSKLTDFS MDMDEWKQVR CLRPVNDELV NAQHQLHAKT RRMRIAERLD ALRELLPIST  180
EGGQAFVVDD VIDHIKFLQL QIKDLCRSRL GGETITEPII FREGYGHYFC HQNMLNEPLE  240
EMMGKLLETN PMAASQLLEN KDLLLLPMDY SEPLA*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008355451.11e-100PREDICTED: transcription factor bHLH7-like
RefseqXP_008368859.11e-100PREDICTED: transcription factor bHLH7
RefseqXP_008368858.11e-100PREDICTED: transcription factor bHLH7
TrEMBLW9QKQ99e-70W9QKQ9_9R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24260.18e-18LJRHL1-like 1